Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014116.1 Corchorus olitorius cultivar O-4 contig14149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5121

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
653--3326
329
8.2
328
78
9
2512
35
16
13
33
1.88
653--3326
644
4.1
647
81
7
2577
35
16
13
33
1.88
3321--3660
7
49.7
7
83
11
411
45
40
0
14
1.45
3321--3660
13
24.9
14
83
9
411
45
40
0
14
1.45
3321--3660
20
16.6
21
82
10
411
45
40
0
14
1.45
3719--5121
333
4.4
322
75
12
1122
37
16
13
33
1.88

Tables:   1

The End!