Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014121.1 Corchorus olitorius cultivar O-4 contig14154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58331

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1761--2218
227
2.0
227
99
0
898
34
14
24
27
1.94
28789--28822
17
1.9
18
88
5
52
52
11
20
14
1.73
35422--35446
12
2.1
12
100
0
50
52
0
8
40
1.31
37710--37766
21
2.9
19
77
10
69
35
21
7
36
1.80
37710--37768
19
3.0
19
78
9
64
33
20
8
37
1.83
49397--49441
21
2.1
22
83
4
56
15
35
8
40
1.79
49405--49447
21
2.0
21
82
8
52
13
39
6
39
1.72
49781--58325
656
13.0
645
76
11
4267
35
15
14
33
1.89

Tables:   1

The End!