Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014125.1 Corchorus olitorius cultivar O-4 contig14158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5173

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--1715
331
5.2
329
81
8
1971
34
15
14
35
1.88
1--1650
650
2.5
637
82
7
2099
34
15
14
35
1.88
1425--2009
293
2.0
291
85
3
800
31
16
15
36
1.90
1715--4137
331
7.3
330
85
4
3056
33
15
15
35
1.89
1715--5087
992
3.4
995
83
6
3581
33
15
15
35
1.89
3533--4760
621
2.0
622
79
3
1362
33
15
15
35
1.89
4177--5055
333
2.6
330
79
6
934
34
14
13
37
1.86

Tables:   1

The End!