Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014251.1 Corchorus olitorius cultivar O-4 contig14284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27996

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1623--2677
228
4.6
229
83
1
1145
29
19
25
24
1.99
1647--2761
456
2.4
456
81
1
1286
28
20
26
24
1.99
5170--6275
228
4.9
228
83
2
1107
28
21
25
24
1.99
5169--6308
456
2.5
454
81
2
1271
28
21
25
24
1.99
17189--17243
29
2.0
29
85
7
78
23
7
7
61
1.47
17706--18533
325
2.5
322
82
5
935
33
14
17
34
1.90
18737--19408
334
2.0
322
85
5
902
32
15
18
33
1.93
17711--20283
869
2.9
881
92
3
4202
33
14
16
34
1.90
19468--20616
320
3.5
323
86
4
1510
34
15
17
33
1.91
19793--22712
880
3.3
881
93
1
4805
33
14
16
35
1.89
22882--22913
1
32.0
1
100
0
64
100
0
0
0
0.00

Tables:   1

The End!