Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014261.1 Corchorus olitorius cultivar O-4 contig14294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19275

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--2861
321
8.9
320
86
3
3697
33
14
16
36
1.89
8--2861
644
4.4
643
86
3
3777
33
14
16
36
1.89
3254--3290
14
2.6
14
91
4
56
56
10
21
10
1.64
4174--4203
13
2.2
14
94
5
53
63
20
6
10
1.47
4340--4373
17
2.0
17
94
0
59
20
29
11
38
1.88
4592--4620
7
4.1
7
100
0
58
72
27
0
0
0.85
5052--5546
52
9.4
52
95
2
850
27
19
16
36
1.94
11038--11072
16
2.2
16
94
0
61
60
0
5
34
1.21
11161--11189
14
2.0
15
93
6
51
27
6
3
62
1.37
12150--12189
20
2.1
19
85
4
53
27
15
25
32
1.95

Tables:   1

The End!