Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014302.1 Corchorus olitorius cultivar O-4 contig14335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43285

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
2693--2845
77
2.0
77
98
0
297
33
11
16
38
1.85
3236--3291
29
1.9
29
82
7
69
53
3
16
26
1.59
4266--4311
23
2.0
23
83
8
58
41
4
2
52
1.33
17667--17724
21
2.9
19
79
5
62
29
20
13
36
1.91
19776--19800
2
12.5
2
100
0
50
52
0
0
48
1.00
27220--27303
42
2.0
42
90
0
132
8
23
42
25
1.82
35094--35953
330
2.6
322
81
7
922
33
12
16
36
1.87
36112--36709
295
2.0
298
85
4
807
31
14
16
37
1.89
36411--43285
331
21.0
329
80
7
6947
33
14
16
35
1.90

Tables:   1

The End!