Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014412.1 Corchorus olitorius cultivar O-4 contig14445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15512

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
359--408
20
2.4
22
80
16
61
44
16
32
8
1.76
6665--9990
47
67.6
47
76
12
2080
28
19
6
44
1.76
6712--8548
507
3.7
489
84
8
2310
29
19
5
45
1.72
6453--8548
47
41.8
50
83
9
2028
29
19
5
45
1.72
8939--9990
196
5.3
194
84
7
1184
29
19
5
46
1.72
9992--10061
22
3.2
22
84
6
72
15
27
4
52
1.61
15289--15451
86
1.9
85
85
6
222
42
4
15
36
1.67

Tables:   1

The End!