Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014460.1 Corchorus olitorius cultivar O-4 contig14493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11605

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
919--980
21
3.0
21
100
0
124
19
9
19
51
1.74
1405--3839
661
3.7
658
80
5
2631
34
14
16
34
1.89
1397--3816
332
7.3
329
77
8
1979
34
14
16
34
1.89
3847--5885
328
6.2
331
80
6
2227
32
14
17
34
1.91
3845--5891
659
3.1
659
79
7
2555
32
14
17
34
1.91
5907--10571
332
14.0
330
79
6
4406
34
15
16
33
1.90
10824--11564
331
2.2
333
79
5
757
35
14
15
34
1.89

Tables:   1

The End!