Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014571.1 Corchorus olitorius cultivar O-4 contig14604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7032

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--1128
335
3.4
334
87
3
1550
30
15
17
37
1.90
1355--1386
14
2.3
14
94
0
55
34
3
12
50
1.56
1870--3204
327
4.1
328
85
2
1810
29
15
18
36
1.92
1870--3204
656
2.0
655
88
2
1953
29
15
18
36
1.92
3217--6421
333
9.8
330
85
4
3994
30
16
17
35
1.92
3217--6967
657
5.7
657
83
6
4232
29
16
17
35
1.92
3218--6967
333
11.4
332
81
6
3988
30
16
17
35
1.92
6392--6452
31
1.9
31
83
9
79
22
4
21
50
1.67

Tables:   1

The End!