Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014622.1 Corchorus olitorius cultivar O-4 contig14655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4131

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1142--2033
31
32.2
28
83
12
825
30
14
21
33
1.93
1713--1943
15
15.3
15
64
20
79
32
15
19
32
1.93
1999--2072
38
1.9
39
91
2
123
29
13
22
33
1.93
1971--2097
64
2.0
64
90
3
202
28
14
22
35
1.93
2036--2450
26
15.5
26
83
7
426
29
14
22
34
1.93
1945--2123
90
2.0
90
90
2
279
27
14
22
35
1.93
2035--2533
26
17.6
31
76
16
270
29
13
21
35
1.92
2436--2528
16
5.9
16
68
14
68
32
11
16
39
1.84
2036--2450
51
7.8
52
81
9
376
29
14
22
34
1.93
3204--4047
329
2.5
326
78
6
795
34
13
15
36
1.86

Tables:   1

The End!