Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014640.1 Corchorus olitorius cultivar O-4 contig14673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5745

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--46
2
22.0
2
80
14
52
0
56
0
43
0.99
138--398
68
3.8
68
88
3
391
7
25
28
38
1.83
343--465
49
2.5
49
85
5
169
8
25
24
42
1.82
1719--2249
283
1.9
282
85
4
748
35
15
15
33
1.89
2509--2538
2
15.0
2
100
0
60
50
0
0
50
1.00
2002--3533
331
4.6
331
85
5
2037
35
15
14
34
1.88
2988--4052
575
1.9
572
86
4
1547
35
14
14
36
1.87
3561--4387
333
2.5
331
90
3
1266
35
14
14
35
1.87

Tables:   1

The End!