Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014722.1 Corchorus olitorius cultivar O-4 contig14755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4601

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94--133
20
2.0
20
95
0
71
27
15
7
50
1.70
337--2269
979
2.0
983
92
1
3209
36
16
13
33
1.88
337--2233
656
2.9
647
80
7
2064
36
16
13
33
1.88
2927--4000
31
38.6
25
79
14
745
33
20
14
31
1.92
3145--3977
31
29.3
31
84
11
909
32
20
14
31
1.93
3652--3764
16
7.2
16
66
16
76
32
17
15
34
1.91
3978--4051
37
2.0
37
91
0
121
33
21
10
33
1.88
3461--4001
145
3.8
133
85
9
523
33
20
14
31
1.93

Tables:   1

The End!