Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014910.1 Corchorus olitorius cultivar O-4 contig14943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39192

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--51
2
23.5
2
95
4
87
47
2
0
50
1.12
971--1004
15
2.3
15
90
10
52
0
11
0
88
0.52
26528--26612
40
2.2
39
85
6
109
31
10
15
42
1.81
29908--29939
11
2.8
12
90
9
50
0
15
0
84
0.63
29903--29939
18
2.1
18
90
5
58
0
16
0
83
0.64
32602--32962
41
9.0
41
95
2
626
31
7
29
31
1.85
32602--32962
122
3.0
121
94
2
620
31
7
29
31
1.85
35680--35766
41
2.2
40
88
8
126
29
14
19
35
1.92
35954--39192
330
9.8
329
82
4
3796
34
17
14
33
1.90
35954--39192
663
4.9
663
91
0
5299
34
17
14
33
1.90

Tables:   1

The End!