Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014911.1 Corchorus olitorius cultivar O-4 contig14944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49106

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--962
330
2.9
330
88
1
1390
34
17
15
33
1.91
1601--2402
322
2.5
322
89
1
1208
35
17
14
32
1.91
5282--8248
659
4.5
652
88
3
3804
34
16
14
33
1.90
5283--8247
329
8.9
329
83
5
3624
34
16
14
33
1.90
5283--8246
992
3.0
986
83
5
3601
34
16
14
33
1.90
7867--7907
18
2.3
18
100
0
82
58
14
0
26
1.37
46280--46306
1
27.0
1
100
0
54
100
0
0
0
0.00

Tables:   1

The End!