Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014918.1 Corchorus olitorius cultivar O-4 contig14951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7875

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--445
131
2.0
131
94
0
465
35
15
14
34
1.88
313--3755
333
10.3
333
86
4
3876
31
15
16
35
1.91
4184--4383
96
2.1
95
83
5
242
37
8
18
36
1.81
4667--4731
31
2.1
31
94
0
112
40
9
15
35
1.79
4883--5122
126
1.9
126
84
5
324
52
1
8
36
1.42
5564--5597
12
2.8
12
90
0
50
20
5
0
73
1.04
5909--5988
29
2.7
29
82
3
79
41
11
17
30
1.84
6040--6729
331
2.1
331
87
2
992
34
13
16
34
1.88
6215--7260
547
1.9
546
87
2
1548
35
14
15
34
1.88
6763--7875
330
3.4
328
87
4
1564
34
15
15
34
1.90

Tables:   1

The End!