Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014946.1 Corchorus olitorius cultivar O-4 contig14979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13553

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5772--7905
333
6.5
329
87
4
2765
33
13
17
35
1.88
5772--9686
663
6.0
654
81
7
4176
33
13
17
35
1.89
7933--9686
332
5.3
330
80
8
1732
33
14
16
35
1.89
7934--9686
656
2.7
655
81
5
1887
33
14
16
35
1.89
9551--9827
141
2.0
141
91
1
457
28
20
17
33
1.95
9298--10154
468
1.8
470
89
3
1357
33
15
17
33
1.91
8905--10484
798
2.0
796
88
2
2375
33
14
17
34
1.91
9689--11740
326
6.3
326
91
2
3039
33
15
18
33
1.92
9694--11740
655
3.1
655
88
3
3184
33
15
18
33
1.92
12183--13549
332
4.1
328
87
2
1979
34
14
17
34
1.90

Tables:   1

The End!