Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015276.1 Corchorus olitorius cultivar O-4 contig15309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7285

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--465
22
2.1
22
83
0
56
52
4
6
36
1.47
1307--1342
19
1.9
18
88
5
54
38
8
22
30
1.83
6132--6701
35
15.0
35
69
18
184
25
15
21
36
1.94
6133--6768
78
8.3
76
75
11
450
25
15
22
37
1.93
6048--6584
115
4.6
115
83
5
647
26
15
21
37
1.93
6052--6622
38
14.9
38
72
15
336
26
15
21
36
1.93
6391--6653
79
3.3
79
76
7
266
25
14
21
37
1.92
6167--6689
157
3.4
157
77
12
463
26
15
22
36
1.93
6633--6774
75
1.9
77
85
2
198
23
14
24
37
1.93

Tables:   1

The End!