Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015283.1 Corchorus olitorius cultivar O-4 contig15316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13569

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1432--1562
66
2.0
67
80
8
151
35
10
15
38
1.82
1436--1623
90
2.1
88
81
6
218
37
9
15
37
1.80
1434--1610
22
8.0
21
72
7
111
35
9
15
38
1.81
1628--2042
22
18.8
21
69
15
146
39
10
16
33
1.83
1628--2390
44
17.8
42
65
18
224
38
9
16
34
1.81
2147--2390
22
11.4
21
68
18
78
40
8
17
34
1.80
2278--2341
23
2.8
23
88
2
85
37
1
20
40
1.62
2278--2374
23
4.4
22
80
14
67
37
7
18
37
1.79
2358--2404
22
2.1
22
88
0
67
34
12
14
38
1.85
2467--2531
22
2.9
23
79
4
69
32
13
16
36
1.89
2607--2660
22
2.5
22
84
0
63
38
14
11
35
1.82
7177--7236
29
2.0
30
84
15
81
38
13
6
41
1.70
7177--7236
30
2.0
29
87
9
86
38
13
6
41
1.70
10064--10239
54
3.3
54
68
15
164
17
48
21
13
1.81
10064--10419
108
3.2
107
84
9
469
15
46
21
16
1.84
10186--10420
120
2.0
120
93
0
398
14
44
22
17
1.85

Tables:   1

The End!