Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015331.1 Corchorus olitorius cultivar O-4 contig15364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12621

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
522--701
95
1.9
95
82
10
224
35
8
17
38
1.80
617--7102
335
19.4
334
79
5
6445
32
14
16
36
1.89
617--7102
672
9.7
668
82
4
6441
32
14
16
36
1.89
7796--8039
94
2.6
93
79
5
249
29
18
10
41
1.84
9357--9499
22
6.5
22
70
16
98
44
7
14
33
1.74
9394--9499
45
2.4
45
78
7
119
45
6
15
33
1.72
9420--9499
23
3.5
23
80
10
76
45
7
15
32
1.74
9542--9603
22
2.8
23
87
4
92
41
9
9
38
1.71
12260--12324
25
2.6
25
92
2
112
26
20
12
41
1.87

Tables:   1

The End!