Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015345.1 Corchorus olitorius cultivar O-4 contig15378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21956

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3418
324
10.5
321
78
7
3303
35
16
14
32
1.89
1--3370
647
5.2
637
79
8
3236
35
16
14
32
1.90
129--3418
971
3.4
973
89
3
4841
35
16
14
33
1.89
5633--5762
63
2.1
63
95
2
235
25
9
26
39
1.86
8969--8996
14
2.0
14
100
0
56
57
14
0
28
1.38
15567--15672
56
1.9
56
88
0
158
18
17
46
16
1.85
15609--15734
65
1.9
65
83
0
162
22
15
47
14
1.81

Tables:   1

The End!