Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015396.1 Corchorus olitorius cultivar O-4 contig15429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24873

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
383--1764
329
4.2
331
79
5
1339
33
15
15
35
1.89
399--1764
660
2.1
658
83
3
1719
33
15
15
35
1.89
2252--2702
244
1.9
236
83
6
550
33
14
13
38
1.86
17097--17127
2
16.0
2
93
6
55
48
0
0
51
1.00
17272--17427
78
2.0
78
94
0
276
32
15
19
33
1.93
17752--17820
30
2.3
30
85
7
86
37
17
13
31
1.88
18652--18704
23
2.2
24
86
6
81
49
13
9
28
1.73
21356--21480
39
3.1
39
86
8
178
30
12
16
41
1.84

Tables:   1

The End!