Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015428.1 Corchorus olitorius cultivar O-4 contig15461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11753

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1787--2011
33
6.8
33
95
0
405
32
6
27
33
1.83
1981--2047
20
3.1
22
63
10
57
34
5
31
28
1.81
1985--2164
41
4.1
43
83
10
206
36
7
27
28
1.83
1985--2053
22
3.2
22
65
10
61
36
7
28
27
1.84
5302--5957
334
2.0
331
81
5
770
33
16
16
34
1.91
5326--7568
654
3.5
622
74
13
1506
33
15
16
34
1.90
6000--11740
332
17.1
327
76
9
2008
33
15
16
35
1.90
7812--11753
332
11.8
331
86
4
4585
33
15
16
35
1.90
7844--11753
660
5.9
661
84
5
4631
33
15
16
35
1.90

Tables:   1

The End!