Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015436.1 Corchorus olitorius cultivar O-4 contig15469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10212

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3446
333
10.5
331
85
5
4372
34
13
17
34
1.89
2660--2688
13
2.3
13
94
5
51
82
3
0
13
0.79
1--3443
645
5.3
657
85
5
4360
34
13
17
34
1.89
3554--4378
334
2.5
326
77
8
803
33
11
16
38
1.85
7144--10098
331
9.0
331
86
3
3945
33
18
13
34
1.90
7144--10098
985
3.0
977
87
3
4138
33
18
13
34
1.90
10063--10133
35
2.0
35
97
0
133
54
18
0
26
1.43

Tables:   1

The End!