Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015447.1 Corchorus olitorius cultivar O-4 contig15480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10312

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--1465
330
4.1
329
78
6
1290
32
14
14
37
1.87
112--1465
661
2.0
662
89
1
2099
32
14
14
37
1.87
2306--2357
27
1.9
27
100
0
104
38
15
7
38
1.76
2941--3211
30
8.8
30
78
12
257
40
18
14
25
1.89
2941--3211
61
4.4
60
78
12
241
40
18
14
25
1.89
2941--3211
127
2.2
117
82
11
303
40
18
14
25
1.89
3116--3234
61
2.0
61
88
3
177
41
15
15
26
1.88
5035--10304
330
16.0
330
78
6
4676
32
15
15
35
1.89
5308--10304
662
7.6
661
87
3
6099
32
15
15
36
1.89

Tables:   1

The End!