Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015469.1 Corchorus olitorius cultivar O-4 contig15502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19788

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--3099
332
9.3
332
89
1
4374
33
17
14
34
1.90
6--3099
663
4.7
663
88
2
4374
33
17
14
34
1.90
2649--3601
503
1.9
503
90
1
1536
33
16
14
36
1.88
3153--4251
330
3.3
326
82
5
1268
34
15
14
35
1.89
8037--10189
330
6.5
327
78
7
1839
37
15
13
33
1.86
10878--11043
31
5.4
31
83
1
181
19
22
25
32
1.97
10882--11043
61
2.6
62
81
1
191
19
22
24
33
1.97
14366--17174
991
2.8
974
81
7
3159
36
16
13
32
1.88
14363--17174
330
8.5
327
79
6
2699
36
16
13
32
1.88
17416--18715
326
3.9
324
81
6
1384
34
14
15
34
1.89

Tables:   1

The End!