Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015497.1 Corchorus olitorius cultivar O-4 contig15530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19046

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1870--1911
13
3.2
13
74
12
50
69
0
9
21
1.17
3363--3440
30
2.5
31
97
2
149
43
5
10
41
1.61
6851--6936
31
2.8
31
85
0
109
36
25
20
17
1.95
6921--6962
20
2.0
20
86
4
57
38
19
19
23
1.93
7388--7436
16
3.0
16
79
5
53
51
2
40
6
1.38
12422--15875
669
5.3
664
78
8
3016
37
15
14
33
1.87
12415--15875
332
10.5
331
78
7
3119
37
15
14
33
1.87
14551--15449
335
2.7
335
81
5
975
37
15
14
32
1.88
16218--16247
15
1.9
16
93
6
53
53
3
0
43
1.17
16590--16632
11
3.9
11
81
0
50
39
20
11
27
1.88

Tables:   1

The End!