Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015523.1 Corchorus olitorius cultivar O-4 contig15556, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17925

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2844--2876
13
2.5
13
100
0
66
24
21
0
54
1.45
3144--3173
15
1.9
16
93
6
53
43
0
3
53
1.17
3524--4194
333
2.0
331
83
5
854
33
14
15
36
1.88
3889--4708
303
2.6
301
80
7
835
33
12
15
37
1.86
5160--7924
331
8.3
330
78
8
2536
32
13
16
37
1.87
5160--7924
670
4.1
658
78
8
2684
32
13
16
37
1.87
11948--12018
37
1.9
37
88
2
108
59
8
11
21
1.58
14314--14345
3
10.7
3
93
0
55
0
28
0
71
0.86

Tables:   1

The End!