Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015554.1 Corchorus olitorius cultivar O-4 contig15587, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25115

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6879--6938
25
2.4
25
86
8
77
41
3
3
51
1.35
6977--7035
26
2.3
26
88
5
84
45
6
3
44
1.47
7102--8284
338
3.6
331
81
6
1408
32
14
16
35
1.90
8894--8968
36
2.1
36
84
0
96
50
18
4
26
1.64
14860--14916
23
2.6
23
78
13
66
36
14
0
49
1.43
14862--14915
16
3.3
16
82
10
65
35
14
0
50
1.44
15176--15213
15
2.4
17
83
16
55
39
0
2
57
1.12
16876--19049
332
6.5
331
80
7
2231
33
14
15
36
1.88
24469--24507
19
2.1
19
100
0
78
38
20
20
20
1.94

Tables:   1

The End!