Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015669.1 Corchorus olitorius cultivar O-4 contig15702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18493

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3304--3442
44
2.9
49
76
14
182
29
10
10
49
1.70
5906--5943
19
2.1
19
90
5
60
21
10
10
57
1.61
7532--7567
1
36.0
1
100
0
72
0
0
0
100
0.00
14634--14673
19
2.0
20
90
4
64
40
27
5
27
1.77
15708--17848
332
6.5
328
78
7
2051
33
14
15
37
1.87
15708--17847
660
3.3
646
83
6
2474
33
13
15
37
1.87
15708--17848
981
2.2
983
80
6
2350
33
14
15
37
1.87

Tables:   1

The End!