Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015705.1 Corchorus olitorius cultivar O-4 contig15738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6489

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1465
528
2.8
530
92
2
2386
36
15
16
32
1.90
1--1465
529
2.8
530
91
2
2388
36
15
16
32
1.90
1059--2047
405
2.4
404
92
2
1624
36
15
15
31
1.89
2045--2109
26
2.9
21
75
20
76
46
20
3
30
1.66
4272--4322
23
2.3
24
80
12
65
37
3
3
54
1.37
3954--4486
266
2.0
267
98
0
1023
38
10
8
42
1.70
4641--4735
45
2.2
43
85
7
122
38
24
5
31
1.77

Tables:   1

The End!