Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015818.1 Corchorus olitorius cultivar O-4 contig15851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13986

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1203--1253
19
2.9
17
80
11
52
17
9
7
64
1.46
1203--1253
15
3.1
15
75
20
57
17
9
7
64
1.46
1620--2802
332
3.6
328
82
4
1365
33
15
15
35
1.89
2845--4184
332
4.0
331
83
4
1571
34
15
15
35
1.88
2882--4184
331
3.9
331
83
5
1506
34
15
14
35
1.88
4666--6456
333
5.5
330
81
7
1988
33
15
14
36
1.88
7480--8435
333
2.9
330
84
4
1197
33
15
14
36
1.89
6542--9358
943
3.0
938
83
6
2724
32
15
14
36
1.88
8447--10710
331
6.9
328
79
6
2038
32
14
15
37
1.87

Tables:   1

The End!