Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015822.1 Corchorus olitorius cultivar O-4 contig15855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12242

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--404
204
2.0
202
92
4
677
43
8
11
36
1.72
471--517
25
1.9
24
91
4
76
53
8
6
31
1.57
508--588
39
2.0
40
90
2
128
37
4
8
49
1.55
804--850
2
23.0
2
95
4
85
48
0
2
48
1.13
7715--7782
6
11.3
6
96
0
100
50
27
5
16
1.68
7838--7936
38
2.9
33
79
16
114
23
33
13
30
1.92
7868--7950
38
2.2
38
86
0
112
22
32
16
27
1.96
8788--10259
667
2.2
648
80
6
1612
37
15
13
34
1.86
8788--10259
335
4.5
331
77
9
1323
37
15
13
34
1.86
10015--10489
256
1.8
259
82
7
619
37
15
14
32
1.88
9345--11194
927
2.0
924
83
5
2367
37
15
13
33
1.87
10273--12239
331
5.9
328
75
8
1573
36
15
14
33
1.88

Tables:   1

The End!