Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015828.1 Corchorus olitorius cultivar O-4 contig15861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14112

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6189--6216
13
2.2
13
100
0
56
42
21
14
21
1.88
11027--12328
380
3.4
379
90
2
1921
34
13
14
36
1.86
11620--11928
155
2.0
156
81
6
358
34
13
14
36
1.86
11870--11913
22
2.0
21
86
4
61
45
4
2
47
1.35
12738--12781
21
2.1
21
95
0
79
40
11
2
45
1.53
12743--12807
21
3.0
21
84
2
76
47
6
1
44
1.37
12239--13169
498
1.8
502
86
5
1349
38
12
12
35
1.82
14046--14094
22
2.2
22
85
0
62
46
10
0
42
1.37

Tables:   1

The End!