Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015829.1 Corchorus olitorius cultivar O-4 contig15862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8360

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2391
376
6.2
378
71
15
1524
34
13
14
36
1.86
1390--1715
163
2.0
163
96
0
607
34
12
13
38
1.83
2050--2092
21
2.0
21
82
8
52
48
2
2
46
1.27
2858--2901
21
2.1
21
91
0
70
40
13
2
43
1.57
2861--2909
21
2.3
21
82
0
62
42
12
2
42
1.53
3500--3543
22
2.0
21
91
4
70
47
0
4
47
1.22
3753--3811
22
2.7
22
84
7
68
49
5
0
45
1.24
2880--4432
643
2.5
641
85
5
2071
36
13
14
35
1.85
4218--4661
232
1.9
230
84
5
599
37
13
14
34
1.86
5277--5336
22
2.8
22
82
7
61
41
6
5
46
1.52
5517--5556
21
1.9
21
84
0
53
45
5
7
42
1.54
5092--6040
499
1.9
507
85
5
1348
36
12
15
36
1.85

Tables:   1

The End!