Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015851.1 Corchorus olitorius cultivar O-4 contig15884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19946

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3032--3336
78
3.8
78
93
2
475
28
28
15
27
1.96
7321--7348
6
4.7
6
100
0
56
50
17
0
32
1.47
8695--8788
28
3.4
28
85
8
129
38
14
19
27
1.91
8997--9074
31
2.5
31
80
0
102
33
24
24
17
1.97
9226--9251
2
13.0
2
100
0
52
50
0
0
50
1.00
13089--13168
42
1.9
42
92
0
133
33
8
32
25
1.86
16336--17625
326
4.0
320
79
10
1276
35
16
15
32
1.90
17852--19946
334
6.5
328
74
12
1603
35
16
14
34
1.88

Tables:   1

The End!