Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015990.1 Corchorus olitorius cultivar O-4 contig16023, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21665

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--1156
329
3.5
332
86
4
1609
36
16
15
31
1.90
2242--4205
322
6.1
320
80
7
1977
32
14
17
36
1.90
2242--4017
656
2.7
643
83
6
2173
32
14
17
35
1.90
5707--5741
9
3.7
9
85
14
52
54
11
0
34
1.37
7688--7718
2
15.5
2
100
0
62
48
0
0
51
1.00
21003--21049
23
2.0
23
100
0
94
42
27
8
21
1.81

Tables:   1

The End!