Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016079.1 Corchorus olitorius cultivar O-4 contig16112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13816

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
432--503
25
2.9
25
89
0
90
23
18
26
31
1.97
7572--7897
174
1.9
175
86
1
467
33
10
11
44
1.75
7800--8282
167
2.9
165
87
3
689
35
10
9
44
1.72
8170--8842
142
4.9
129
79
11
500
34
12
9
43
1.74
8299--8851
142
3.9
139
87
2
750
34
12
8
43
1.73

Tables:   1

The End!