Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016190.1 Corchorus olitorius cultivar O-4 contig16223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6523

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--1245
323
3.8
324
82
5
1519
35
16
15
32
1.91
1343--1377
16
2.2
16
100
0
70
45
17
25
11
1.81
1473--1755
41
6.9
41
87
3
363
37
19
13
29
1.90
3493--3640
70
2.1
69
93
1
251
52
13
18
15
1.75
3492--3705
70
3.2
64
82
9
241
50
14
18
15
1.77
4518--4800
41
6.9
41
86
3
354
37
19
13
29
1.90
5018--6520
323
4.7
320
84
5
1841
34
16
16
32
1.91
5018--6519
648
2.3
640
85
5
1975
34
16
16
32
1.91

Tables:   1

The End!