Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016242.1 Corchorus olitorius cultivar O-4 contig16275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26235

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
2
13.5
2
100
0
54
48
0
0
51
1.00
113--1499
328
4.2
328
77
7
1377
37
15
13
33
1.87
255--1498
673
1.9
663
83
4
1622
36
15
13
34
1.87
1788--3016
648
1.9
655
82
6
1589
37
14
14
33
1.87
1788--3031
326
3.8
322
78
10
1043
36
14
14
34
1.87
6518--6579
16
3.9
16
77
6
63
62
1
6
29
1.29
6518--6576
17
3.6
17
79
4
61
66
1
6
25
1.26
6519--6579
33
1.9
31
90
6
95
62
1
6
29
1.30
12592--12667
29
2.6
29
83
4
100
21
22
13
43
1.86
12703--12759
29
2.0
29
89
6
89
43
14
21
21
1.87
13434--13459
3
8.7
3
100
0
52
34
30
0
34
1.58

Tables:   1

The End!