Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016262.1 Corchorus olitorius cultivar O-4 contig16295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  334338

Tables:   1   2   

This is table  2  of  2  ( 127 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325792--325835
23
1.9
23
95
0
79
0
6
15
77
0.97
327389--327417
12
2.3
13
88
11
51
37
17
13
31
1.89
327392--327417
12
2.2
12
100
0
52
38
15
15
30
1.88
331792--331921
65
2.0
66
96
1
244
22
12
20
45
1.84
334256--334295
20
2.0
20
85
14
55
0
15
2
82
0.77
334258--334301
8
5.2
8
78
10
52
0
13
2
84
0.73
334258--334301
11
3.8
11
84
6
52
0
13
2
84
0.73

Tables:   1   2

The End!