Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016289.1 Corchorus olitorius cultivar O-4 contig16322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6098

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--2395
333
7.2
332
83
4
2982
33
15
14
36
1.88
4--2395
664
3.6
655
84
3
3001
33
15
14
36
1.88
2450--3915
660
2.2
661
89
1
2224
33
15
14
36
1.88
2439--5875
973
3.5
971
81
6
3652
33
15
14
36
1.88
4080--6090
650
3.1
660
88
4
3067
33
15
14
36
1.88

Tables:   1

The End!