Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: AWUE01016399.1 Corchorus olitorius cultivar O-4 contig16432, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 4357

Tables:   1   

This is table  1  of  1  ( 5 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1872
330
5.8
324
87
3
2536
35
16
14
33
1.89
2493--3281
332
2.4
328
81
4
861
36
16
13
33
1.88
3297--4160
27
31.6
27
86
5
1052
33
21
13
31
1.92
3297--4160
53
15.8
54
87
5
1052
33
21
13
31
1.92
3354--4160
133
6.0
133
88
5
1052
33
22
13
30
1.93

Tables:   1   

The End!