Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016423.1 Corchorus olitorius cultivar O-4 contig16456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37614

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--426
42
10.5
41
84
8
541
40
17
16
25
1.90
430--7947
333
22.8
331
78
7
6882
31
15
16
36
1.90
430--7955
666
11.4
665
82
6
7670
31
15
16
36
1.90
8987--9065
37
2.1
39
92
4
135
34
27
12
25
1.92
15743--15779
19
1.9
19
94
0
65
29
18
13
37
1.90

Tables:   1

The End!