Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016427.1 Corchorus olitorius cultivar O-4 contig16460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7686

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--83
2
41.5
2
100
0
166
0
49
0
50
1.00
192--293
34
3.0
34
97
0
195
2
33
16
47
1.62
253--595
62
5.5
62
97
0
634
3
39
21
35
1.70
2191--3266
332
3.2
331
78
6
941
35
15
15
34
1.89
3530--3571
18
2.3
18
80
11
50
35
2
2
59
1.23
3537--3579
19
2.3
18
84
7
59
34
4
2
58
1.32
3910--7686
331
11.5
329
80
5
3960
36
15
15
33
1.89
3910--7657
987
3.8
984
82
5
4444
36
15
15
32
1.89

Tables:   1

The End!