Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016433.1 Corchorus olitorius cultivar O-4 contig16466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48149

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--1873
331
5.5
331
78
9
1888
35
17
15
32
1.91
1202--1280
37
2.1
37
97
0
149
43
25
2
29
1.68
2205--2246
15
2.8
15
96
0
75
19
7
33
40
1.78
2232--4452
330
6.7
330
86
2
2827
34
16
15
33
1.90
4487--7624
986
3.2
986
91
2
4997
35
15
15
33
1.89
4487--7624
332
9.5
332
82
2
3887
35
15
15
33
1.89
7363--7869
262
1.9
262
91
0
827
35
17
16
30
1.92
7033--8214
593
2.0
593
86
1
1667
36
16
15
31
1.90
7626--9607
332
6.0
330
80
4
2117
34
16
15
33
1.90
9477--9752
138
2.0
138
92
1
464
35
17
9
37
1.82
9691--10872
333
3.6
331
89
1
1643
35
15
13
34
1.87
18381--18417
5
7.8
5
85
8
51
81
2
0
16
0.81
18891--18930
21
1.9
21
94
0
71
27
22
30
20
1.98
42607--42664
30
1.9
30
92
0
98
27
17
3
51
1.61

Tables:   1

The End!