Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016474.1 Corchorus olitorius cultivar O-4 contig16507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12788

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--511
237
1.8
238
88
1
677
36
12
13
37
1.83
271--6093
668
8.7
660
83
5
6316
32
14
14
37
1.87
273--6124
333
17.5
330
80
5
6146
32
14
14
37
1.87
4661--4697
14
2.4
16
78
13
51
29
8
13
48
1.71
7452--7824
20
18.5
20
72
3
273
28
27
7
36
1.85
7452--7823
40
9.2
40
94
1
595
28
27
7
36
1.84

Tables:   1

The End!