Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016506.1 Corchorus olitorius cultivar O-4 contig16539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9745

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--2738
332
8.2
331
74
10
1870
36
15
14
33
1.87
4565--4921
20
17.5
20
73
4
246
28
27
7
36
1.83
4565--4749
41
4.5
41
94
0
318
28
25
8
37
1.85
4727--4770
22
2.0
22
90
0
70
36
29
0
34
1.58
4565--4784
82
2.7
82
87
2
237
30
25
7
36
1.84
4605--4900
144
2.1
142
91
3
477
29
28
6
36
1.83
5686--5770
41
2.1
41
93
4
145
40
15
25
18
1.90

Tables:   1

The End!