Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016509.1 Corchorus olitorius cultivar O-4 contig16542, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16341

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75--132
22
2.7
21
80
17
73
60
1
0
37
1.07
56--130
7
10.6
7
77
18
66
54
1
0
44
1.08
503--577
38
2.0
38
97
0
141
33
14
18
33
1.91
799--3554
948
2.9
949
79
9
2807
35
16
14
33
1.89
848--3514
319
8.3
320
78
8
2498
35
15
14
33
1.89
848--3600
657
4.3
640
80
7
3000
35
16
14
33
1.89
1672--3598
324
6.0
320
77
7
1846
35
15
14
33
1.89
4284--4357
36
2.1
36
94
0
130
32
8
18
40
1.80
3625--6825
643
4.8
684
82
8
3680
34
16
15
33
1.90
4484--6825
326
7.2
320
80
6
2571
35
16
14
33
1.90
6835--6895
30
2.0
30
93
0
104
36
16
19
27
1.93

Tables:   1

The End!