Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016529.1 Corchorus olitorius cultivar O-4 contig16562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7930

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1092--5521
332
13.3
325
73
12
1901
33
14
15
36
1.88
2682--5525
325
8.5
331
73
12
1517
33
14
15
36
1.88
3749--5093
701
1.9
682
79
10
1465
32
13
16
37
1.88
7747--7827
39
2.0
40
92
2
137
50
8
3
37
1.51
7818--7864
25
1.9
24
95
4
85
29
6
8
55
1.55

Tables:   1

The End!