Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01016847.1 Corchorus olitorius cultivar O-4 contig16880, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24748

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2467--2491
7
3.6
7
100
0
50
28
28
12
32
1.92
7046--7372
36
9.3
36
80
5
312
21
19
17
40
1.91
7043--7372
70
4.7
70
74
11
257
21
20
17
41
1.91
7583--8361
30
26.3
30
85
3
963
18
14
19
47
1.83
7583--8361
117
6.6
116
87
4
952
18
14
19
47
1.83
8339--8421
32
2.6
32
75
3
87
26
15
18
39
1.90
14749--14781
16
2.1
16
94
0
57
39
15
12
33
1.84
15313--15567
40
6.5
40
85
3
277
38
10
20
30
1.87
15653--16639
141
6.9
141
90
2
1481
34
16
19
29
1.94
17829--17865
19
1.9
19
88
0
56
16
18
2
62
1.45

Tables:   1

The End!